Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 AL359075.1-203ENST00000462729 1002 ntBASIC21.46■■□□□ 1.03
NEK1Q96PY6 AC113404.2-201ENST00000507884 177 ntBASIC21.46■■□□□ 1.03
NEK1Q96PY6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
NEK1Q96PY6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
NEK1Q96PY6 KRT89P-201ENST00000620027 1478 ntBASIC21.45■■□□□ 1.03
NEK1Q96PY6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 LINC00602-201ENST00000629776 2065 ntBASIC21.45■■□□□ 1.02
NEK1Q96PY6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NEK1Q96PY6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.45■■□□□ 1.02
NEK1Q96PY6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 AC005332.8-201ENST00000622750 2735 ntBASIC21.44■■□□□ 1.02
NEK1Q96PY6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 FAM8A6P-201ENST00000407496 1135 ntBASIC21.44■■□□□ 1.02
NEK1Q96PY6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 AC063952.2-201ENST00000498792 1227 ntBASIC21.44■■□□□ 1.02
NEK1Q96PY6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 HYMAI.1-201ENST00000620949 238 ntBASIC21.44■■□□□ 1.02
NEK1Q96PY6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NEK1Q96PY6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
NEK1Q96PY6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEK1Q96PY6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEK1Q96PY6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEK1Q96PY6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NEK1Q96PY6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 HBZP1-201ENST00000354915 429 ntBASIC21.43■■□□□ 1.02
NEK1Q96PY6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NEK1Q96PY6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 AC112907.2-201ENST00000448639 330 ntBASIC21.43■■□□□ 1.02
NEK1Q96PY6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.43■■□□□ 1.02
NEK1Q96PY6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NEK1Q96PY6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NEK1Q96PY6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms