Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.52■■□□□ 1.04
DDX11Q96FC9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
DDX11Q96FC9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX11Q96FC9 AL162741.1-201ENST00000565563 1558 ntBASIC21.52■■□□□ 1.04
DDX11Q96FC9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
DDX11Q96FC9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
DDX11Q96FC9 HCG11-201ENST00000411553 5696 ntBASIC21.51■■□□□ 1.03
DDX11Q96FC9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX11Q96FC9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX11Q96FC9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX11Q96FC9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX11Q96FC9 HTR7P1-202ENST00000624664 4411 ntBASIC21.49■■□□□ 1.03
DDX11Q96FC9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 AP000593.1-201ENST00000393668 712 ntBASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 KRT18P23-201ENST00000435622 1283 ntBASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 AC112497.1-201ENST00000624824 639 ntBASIC21.49■■□□□ 1.03
DDX11Q96FC9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
DDX11Q96FC9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX11Q96FC9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms