Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 TSPY12P-201ENST00000421279 868 ntBASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.79■□□□□ 0.28
CTHRC1Q96CG8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTHRC1Q96CG8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 TSPY22P-201ENST00000427496 604 ntBASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 AC068472.1-201ENST00000474589 881 ntBASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.77■□□□□ 0.28
CTHRC1Q96CG8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 AC100803.2-201ENST00000562459 1963 ntBASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTHRC1Q96CG8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 AC068880.1-201ENST00000507289 2297 ntBASIC16.76■□□□□ 0.27
CTHRC1Q96CG8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms