Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP6V0A1Q93050 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SAPCD2P3-201ENST00000455031 850 ntBASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 AC106795.1-205ENST00000512851 1056 ntBASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 AL662844.1-201ENST00000546340 181 ntBASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 AC004408.2-201ENST00000623613 2777 ntBASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP6V0A1Q93050 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 KRT18P65-201ENST00000439811 1286 ntBASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 AC079776.4-201ENST00000511039 504 ntBASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 REXO1L6P-202ENST00000619970 1078 ntBASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP6V0A1Q93050 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 MRPL3P1-201ENST00000400109 1033 ntBASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 POM121L3P-201ENST00000419331 1163 ntBASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms