Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9Q92623 RCC2P3-201ENST00000418112 1537 ntBASIC17.25■□□□□ 0.35
TTC9Q92623 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9Q92623 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9Q92623 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC9Q92623 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9Q92623 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9Q92623 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC9Q92623 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC9Q92623 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 AF186996.4-201ENST00000467186 377 ntBASIC17.24■□□□□ 0.35
TTC9Q92623 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC9Q92623 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.24■□□□□ 0.35
TTC9Q92623 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC9Q92623 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 AL592071.1-201ENST00000611956 408 ntBASIC17.24■□□□□ 0.35
TTC9Q92623 AC068587.9-201ENST00000641814 219 ntBASIC17.24■□□□□ 0.35
TTC9Q92623 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9Q92623 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9Q92623 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC9Q92623 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC9Q92623 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TTC9Q92623 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 MIR940-201ENST00000401276 94 ntBASIC17.23■□□□□ 0.35
TTC9Q92623 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TTC9Q92623 RPL13AP23-201ENST00000480739 586 ntBASIC17.23■□□□□ 0.35
TTC9Q92623 AL139424.1-201ENST00000607572 797 ntBASIC17.23■□□□□ 0.35
TTC9Q92623 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9Q92623 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC9Q92623 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9Q92623 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.22■□□□□ 0.35
TTC9Q92623 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
TTC9Q92623 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.22■□□□□ 0.35
TTC9Q92623 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC9Q92623 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 RN7SL606P-201ENST00000472779 293 ntBASIC17.22■□□□□ 0.35
TTC9Q92623 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC9Q92623 AC073648.2-201ENST00000510116 352 ntBASIC17.22■□□□□ 0.35
TTC9Q92623 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 AP005901.3-202ENST00000581653 237 ntBASIC17.22■□□□□ 0.35
TTC9Q92623 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TTC9Q92623 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9Q92623 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 HEIH-201ENST00000623091 1652 ntBASIC17.22■□□□□ 0.35
TTC9Q92623 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TTC9Q92623 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms