Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 RPS2P55-201ENST00000397318 883 ntBASIC14.33□□□□□ -0.12
NPIPB3Q92617 AC107956.1-201ENST00000494359 873 ntBASIC14.33□□□□□ -0.12
NPIPB3Q92617 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NPIPB3Q92617 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPIPB3Q92617 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 ABHD17AP1-201ENST00000358206 933 ntBASIC14.32□□□□□ -0.12
NPIPB3Q92617 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 KRT18P23-201ENST00000435622 1283 ntBASIC14.32□□□□□ -0.12
NPIPB3Q92617 AL355355.2-201ENST00000442321 338 ntBASIC14.32□□□□□ -0.12
NPIPB3Q92617 TSPY20P-201ENST00000450910 630 ntBASIC14.32□□□□□ -0.12
NPIPB3Q92617 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 REXO1L10P-201ENST00000615707 1290 ntBASIC14.32□□□□□ -0.12
NPIPB3Q92617 REXO1L12P-201ENST00000622156 912 ntBASIC14.32□□□□□ -0.12
NPIPB3Q92617 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPB3Q92617 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPB3Q92617 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 AL158047.1-201ENST00000445918 881 ntBASIC14.31□□□□□ -0.12
NPIPB3Q92617 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 AC113410.3-201ENST00000623366 203 ntBASIC14.31□□□□□ -0.12
NPIPB3Q92617 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPB3Q92617 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 HOXB1-202ENST00000577092 1414 ntBASIC14.31□□□□□ -0.12
NPIPB3Q92617 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPB3Q92617 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPB3Q92617 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms