Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF4Q92544 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF4Q92544 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AC009065.1-201ENST00000564055 1225 ntBASIC17.12■□□□□ 0.33
TM9SF4Q92544 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AL121772.3-201ENST00000610840 674 ntBASIC17.12■□□□□ 0.33
TM9SF4Q92544 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TM9SF4Q92544 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 IRX1P1-201ENST00000438849 1838 ntBASIC17.12■□□□□ 0.33
TM9SF4Q92544 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.12■□□□□ 0.33
TM9SF4Q92544 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 AC104390.1-201ENST00000555663 520 ntBASIC17.11■□□□□ 0.33
TM9SF4Q92544 MIR3180-1-201ENST00000580374 94 ntBASIC17.11■□□□□ 0.33
TM9SF4Q92544 MIR3180-3-201ENST00000584616 94 ntBASIC17.11■□□□□ 0.33
TM9SF4Q92544 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 AC010240.3-201ENST00000607688 395 ntBASIC17.11■□□□□ 0.33
TM9SF4Q92544 AC079602.3-201ENST00000623931 403 ntBASIC17.11■□□□□ 0.33
TM9SF4Q92544 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TM9SF4Q92544 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TM9SF4Q92544 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 AP002383.4-201ENST00000442518 975 ntBASIC17.1■□□□□ 0.33
TM9SF4Q92544 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 MIR3180-4-201ENST00000582223 153 ntBASIC17.1■□□□□ 0.33
TM9SF4Q92544 AC090616.6-201ENST00000582640 721 ntBASIC17.1■□□□□ 0.33
TM9SF4Q92544 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms