Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 AC068137.2-201ENST00000605408 478 ntBASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 GAPDHP21-201ENST00000450301 1010 ntBASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 AC073130.3-201ENST00000624389 2278 ntBASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.12□□□□□ -0.47
ALMS1Q8TCU4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 PGM5P2-202ENST00000637225 1043 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AL805961.1-202ENST00000641562 540 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AF228730.6-201ENST00000641497 218 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AC084121.3-201ENST00000641716 218 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AC105233.6-201ENST00000642093 218 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AC141586.3-201ENST00000562166 1838 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AL020989.1-201ENST00000422979 469 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 AC004449.1-201ENST00000564240 433 ntBASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ALMS1Q8TCU4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 DUX4L27-201ENST00000554796 1261 ntBASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.1□□□□□ -0.47
ALMS1Q8TCU4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms