Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 INIP-202ENST00000374236 874 ntTSL 2 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC254562.1-201ENST00000417586 456 ntBASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC023274.1-201ENST00000418278 595 ntBASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 MTDHP4-201ENST00000600287 670 ntBASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 AC105339.3-201ENST00000560043 636 ntBASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 GMCL1P1-201ENST00000463439 1581 ntBASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFAP43Q8NDM7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC28.14■■■□□ 2.1
CFAP43Q8NDM7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC28.14■■■□□ 2.09
CFAP43Q8NDM7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC28.14■■■□□ 2.09
CFAP43Q8NDM7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.14■■■□□ 2.09
CFAP43Q8NDM7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CFAP43Q8NDM7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC28.14■■■□□ 2.09
CFAP43Q8NDM7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC28.14■■■□□ 2.09
CFAP43Q8NDM7 AC002310.6-201ENST00000624451 1377 ntBASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 LAGE3P1-201ENST00000425356 484 ntBASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 MCCD1P2-201ENST00000423228 335 ntBASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 HTR5BP-201ENST00000430851 1154 ntBASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFAP43Q8NDM7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 KRT18P28-201ENST00000453838 1332 ntBASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 SPCS2P1-201ENST00000561636 679 ntBASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CFAP43Q8NDM7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFAP43Q8NDM7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CFAP43Q8NDM7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CFAP43Q8NDM7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms