Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 PCDHB18P-201ENST00000524813 2368 ntBASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DNAAF3Q8N9W5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 SEC1P-202ENST00000473944 940 ntBASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 LINC01126-201ENST00000623515 1646 ntBASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.48■□□□□ 0.55
DNAAF3Q8N9W5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 FZD10-202ENST00000539839 3282 ntBASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 NEK4P2-201ENST00000580004 1012 ntBASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF3Q8N9W5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AP000997.3-201ENST00000623333 2250 ntBASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AP000523.1-201ENST00000398242 1049 ntBASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 AC092865.7-201ENST00000641832 219 ntBASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF3Q8N9W5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms