Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT78Q8N1N4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.52■□□□□ 0.39
KRT78Q8N1N4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT78Q8N1N4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.51■□□□□ 0.39
KRT78Q8N1N4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.51■□□□□ 0.39
KRT78Q8N1N4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT78Q8N1N4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 AC092647.4-201ENST00000457211 535 ntBASIC17.5■□□□□ 0.39
KRT78Q8N1N4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 AL136038.4-201ENST00000603606 1261 ntBASIC17.5■□□□□ 0.39
KRT78Q8N1N4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT78Q8N1N4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 AC006011.2-201ENST00000621313 1158 ntBASIC17.49■□□□□ 0.39
KRT78Q8N1N4 AC093010.1-201ENST00000473625 1624 ntBASIC17.49■□□□□ 0.39
KRT78Q8N1N4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT78Q8N1N4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms