Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 AC023274.1-201ENST00000418278 595 ntBASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 AC093484.2-201ENST00000580996 2166 ntBASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 KRT8P32-201ENST00000512863 1461 ntBASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 CLDN5-201ENST00000403084 2357 ntBASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 AC116407.3-201ENST00000623905 1129 ntBASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 MIR3687-2-201ENST00000577708 61 ntBASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 MIR3687-1-201ENST00000614492 61 ntBASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 FAM215A-202ENST00000632077 792 ntBASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 KRT8P50-201ENST00000562022 1438 ntBASIC16.4■□□□□ 0.22
RP1L1Q8IWN7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RP1L1Q8IWN7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RP1L1Q8IWN7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 AC005082.1-201ENST00000413042 2259 ntBASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 MTDHP3-201ENST00000594186 672 ntBASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 MTMR9LP-203ENST00000426597 1545 ntBASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.39■□□□□ 0.21
RP1L1Q8IWN7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms