Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HLA-J-202ENST00000469281 1241 ntBASIC22.62■■□□□ 1.21
COL23A1Q86Y22 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 IGHV3-65-201ENST00000523210 341 ntBASIC22.62■■□□□ 1.21
COL23A1Q86Y22 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.61■■□□□ 1.21
COL23A1Q86Y22 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL23A1Q86Y22 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 AC010460.3-201ENST00000511359 1579 ntBASIC22.6■■□□□ 1.21
COL23A1Q86Y22 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 AC008667.4-201ENST00000607370 168 ntBASIC22.6■■□□□ 1.21
COL23A1Q86Y22 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.6■■□□□ 1.21
COL23A1Q86Y22 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AC092474.2-201ENST00000424288 719 ntBASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AC122714.2-201ENST00000502787 707 ntBASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AP000344.2-201ENST00000512987 629 ntBASIC22.59■■□□□ 1.21
COL23A1Q86Y22 PDPK2P-202ENST00000562415 1191 ntBASIC22.59■■□□□ 1.21
COL23A1Q86Y22 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 KRT8P47-201ENST00000604727 1398 ntBASIC22.59■■□□□ 1.21
COL23A1Q86Y22 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.59■■□□□ 1.21
COL23A1Q86Y22 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL23A1Q86Y22 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms