Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.19■■□□□ 1.14
USP48Q86UV5 AC009065.1-201ENST00000564055 1225 ntBASIC22.19■■□□□ 1.14
USP48Q86UV5 AC106730.1-201ENST00000566722 1090 ntBASIC22.19■■□□□ 1.14
USP48Q86UV5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.19■■□□□ 1.14
USP48Q86UV5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.19■■□□□ 1.14
USP48Q86UV5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP48Q86UV5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
USP48Q86UV5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP48Q86UV5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
USP48Q86UV5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
USP48Q86UV5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP48Q86UV5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
USP48Q86UV5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
USP48Q86UV5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
USP48Q86UV5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.18■■□□□ 1.14
USP48Q86UV5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.18■■□□□ 1.14
USP48Q86UV5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 IRX1P1-201ENST00000438849 1838 ntBASIC22.18■■□□□ 1.14
USP48Q86UV5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
USP48Q86UV5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.18■■□□□ 1.14
USP48Q86UV5 PMS2P7-201ENST00000506558 1336 ntBASIC22.18■■□□□ 1.14
USP48Q86UV5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 IGHGP-201ENST00000390555 1178 ntBASIC22.18■■□□□ 1.14
USP48Q86UV5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
USP48Q86UV5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.18■■□□□ 1.14
USP48Q86UV5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.18■■□□□ 1.14
USP48Q86UV5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
USP48Q86UV5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
USP48Q86UV5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP48Q86UV5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.17■■□□□ 1.14
USP48Q86UV5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.17■■□□□ 1.14
USP48Q86UV5 AL133373.2-201ENST00000623187 2828 ntBASIC22.17■■□□□ 1.14
USP48Q86UV5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.17■■□□□ 1.14
USP48Q86UV5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.17■■□□□ 1.14
USP48Q86UV5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
USP48Q86UV5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.17■■□□□ 1.14
USP48Q86UV5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 FAM220CP-201ENST00000395253 831 ntBASIC22.17■■□□□ 1.14
USP48Q86UV5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.17■■□□□ 1.14
USP48Q86UV5 KRT18P67-201ENST00000432816 1264 ntBASIC22.17■■□□□ 1.14
USP48Q86UV5 RNPS1P1-201ENST00000507437 918 ntBASIC22.17■■□□□ 1.14
USP48Q86UV5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.17■■□□□ 1.14
USP48Q86UV5 TERC-201ENST00000602385 541 ntBASIC22.17■■□□□ 1.14
USP48Q86UV5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.17■■□□□ 1.14
USP48Q86UV5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.17■■□□□ 1.14
USP48Q86UV5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.17■■□□□ 1.14
USP48Q86UV5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP48Q86UV5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
USP48Q86UV5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 AC008556.1-201ENST00000610908 2040 ntBASIC22.16■■□□□ 1.14
USP48Q86UV5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
USP48Q86UV5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 KRT8P7-201ENST00000533003 1432 ntBASIC22.16■■□□□ 1.14
USP48Q86UV5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 AC243591.1-201ENST00000452967 1364 ntBASIC22.16■■□□□ 1.14
USP48Q86UV5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 MINOS1P3-201ENST00000457048 203 ntBASIC22.16■■□□□ 1.14
USP48Q86UV5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.16■■□□□ 1.14
USP48Q86UV5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.16■■□□□ 1.14
USP48Q86UV5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.16■■□□□ 1.14
USP48Q86UV5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 BICD1-207ENST00000551848 1962 ntBASIC22.16■■□□□ 1.14
USP48Q86UV5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USP48Q86UV5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.16■■□□□ 1.14
USP48Q86UV5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP48Q86UV5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP48Q86UV5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
USP48Q86UV5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
USP48Q86UV5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms