Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 AC018845.2-201ENST00000568326 409 ntBASIC18.54■□□□□ 0.56
DENND4AQ7Z401 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 AC097374.2-201ENST00000618617 1306 ntBASIC18.54■□□□□ 0.56
DENND4AQ7Z401 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 HTR5BP-201ENST00000430851 1154 ntBASIC18.54■□□□□ 0.56
DENND4AQ7Z401 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DENND4AQ7Z401 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 ANO7L1-203ENST00000602586 1720 ntBASIC18.53■□□□□ 0.56
DENND4AQ7Z401 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 KRT18P2-201ENST00000447938 1258 ntBASIC18.53■□□□□ 0.56
DENND4AQ7Z401 CYMP-203ENST00000474680 1263 ntBASIC18.53■□□□□ 0.56
DENND4AQ7Z401 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.53■□□□□ 0.56
DENND4AQ7Z401 AC132938.6-201ENST00000623828 1655 ntBASIC18.53■□□□□ 0.56
DENND4AQ7Z401 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 AC122714.2-201ENST00000502787 707 ntBASIC18.52■□□□□ 0.56
DENND4AQ7Z401 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.52■□□□□ 0.56
DENND4AQ7Z401 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 AL022326.1-202ENST00000641533 845 ntBASIC18.52■□□□□ 0.55
DENND4AQ7Z401 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DENND4AQ7Z401 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.51■□□□□ 0.55
DENND4AQ7Z401 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
DENND4AQ7Z401 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
DENND4AQ7Z401 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms