Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 AL136379.1-201ENST00000623471 2642 ntBASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00173Q6ZV60 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 GPX1P1-201ENST00000388829 606 ntBASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 DUX4L16-201ENST00000555130 1264 ntBASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 BID-214ENST00000617586 542 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 AC068587.9-201ENST00000641814 219 ntBASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00173Q6ZV60 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.15□□□□□ -0.31
LINC00173Q6ZV60 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00173Q6ZV60 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
LINC00173Q6ZV60 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.15□□□□□ -0.31
LINC00173Q6ZV60 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 AC023824.1-201ENST00000562945 2975 ntBASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00173Q6ZV60 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms