Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 KRT18P31-201ENST00000506277 1292 ntBASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 AC091304.2-201ENST00000564639 760 ntBASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 NSUN5P1-202ENST00000421140 1535 ntBASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 NSUN5P2-203ENST00000457352 1529 ntBASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF17Q5VTA0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEF17Q5VTA0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 AC011840.4-201ENST00000578471 627 ntBASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 AL121772.3-201ENST00000610840 674 ntBASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF17Q5VTA0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AC004870.1-201ENST00000315132 882 ntBASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 TSPY12P-201ENST00000421279 868 ntBASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF17Q5VTA0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms