Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 AC011467.2-201ENST00000598425 242 ntBASIC19.13■□□□□ 0.65
VARS2Q5ST30 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 AC008608.2-201ENST00000606089 416 ntBASIC19.13■□□□□ 0.65
VARS2Q5ST30 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARS2Q5ST30 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VARS2Q5ST30 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 AC092473.1-201ENST00000441098 221 ntBASIC19.12■□□□□ 0.65
VARS2Q5ST30 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 AC079776.4-201ENST00000511039 504 ntBASIC19.12■□□□□ 0.65
VARS2Q5ST30 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VARS2Q5ST30 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
VARS2Q5ST30 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 HLA-A-201ENST00000376802 1334 ntBASIC19.11■□□□□ 0.65
VARS2Q5ST30 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 FAM197Y8-203ENST00000450145 560 ntBASIC19.11■□□□□ 0.65
VARS2Q5ST30 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 PHGDH-209ENST00000641074 1780 ntBASIC19.11■□□□□ 0.65
VARS2Q5ST30 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VARS2Q5ST30 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.11■□□□□ 0.65
VARS2Q5ST30 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 RN7SL602P-201ENST00000578326 324 ntBASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.1■□□□□ 0.65
VARS2Q5ST30 AC064862.7-201ENST00000604520 867 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms