Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDR2Q01850 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDR2Q01850 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.34■□□□□ 0.69
CDR2Q01850 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDR2Q01850 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR2Q01850 AC132938.6-201ENST00000623828 1655 ntBASIC19.33■□□□□ 0.69
CDR2Q01850 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR2Q01850 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDR2Q01850 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDR2Q01850 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.33■□□□□ 0.69
CDR2Q01850 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDR2Q01850 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.33■□□□□ 0.68
CDR2Q01850 AC113347.1-201ENST00000413321 391 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 ATP5G1P1-201ENST00000448724 379 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.33■□□□□ 0.68
CDR2Q01850 AC034232.1-201ENST00000506026 1064 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDR2Q01850 AC008687.5-201ENST00000593746 558 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.33■□□□□ 0.68
CDR2Q01850 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.33■□□□□ 0.68
CDR2Q01850 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 GNAS-203ENST00000306120 1878 ntBASIC19.33■□□□□ 0.68
CDR2Q01850 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CDR2Q01850 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDR2Q01850 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDR2Q01850 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.32■□□□□ 0.68
CDR2Q01850 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDR2Q01850 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.32■□□□□ 0.68
CDR2Q01850 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDR2Q01850 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 COX11P1-201ENST00000489116 835 ntBASIC19.32■□□□□ 0.68
CDR2Q01850 DUTP2-201ENST00000519164 463 ntBASIC19.32■□□□□ 0.68
CDR2Q01850 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 AC140113.3-201ENST00000605663 199 ntBASIC19.32■□□□□ 0.68
CDR2Q01850 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 AC005363.2-201ENST00000618631 242 ntBASIC19.32■□□□□ 0.68
CDR2Q01850 AL031432.5-201ENST00000641059 760 ntBASIC19.32■□□□□ 0.68
CDR2Q01850 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.32■□□□□ 0.68
CDR2Q01850 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.32■□□□□ 0.68
CDR2Q01850 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDR2Q01850 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 KRT18P55-202ENST00000578578 1546 ntBASIC19.31■□□□□ 0.68
CDR2Q01850 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR2Q01850 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CDR2Q01850 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR2Q01850 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR2Q01850 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 TERF1P1-201ENST00000311003 1181 ntBASIC19.31■□□□□ 0.68
CDR2Q01850 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR2Q01850 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.31■□□□□ 0.68
CDR2Q01850 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR2Q01850 AL441883.1-201ENST00000566170 1045 ntBASIC19.31■□□□□ 0.68
CDR2Q01850 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDR2Q01850 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR2Q01850 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDR2Q01850 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.31■□□□□ 0.68
CDR2Q01850 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR2Q01850 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.3■□□□□ 0.68
CDR2Q01850 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR2Q01850 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR2Q01850 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR2Q01850 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDR2Q01850 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDR2Q01850 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms