Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 AP002383.4-201ENST00000442518 975 ntBASIC18.22■□□□□ 0.51
AP1S1P61966 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
AP1S1P61966 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.22■□□□□ 0.51
AP1S1P61966 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.22■□□□□ 0.51
AP1S1P61966 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
AP1S1P61966 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 REXO1L9P-201ENST00000604264 2108 ntBASIC18.22■□□□□ 0.51
AP1S1P61966 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 KRT18P1-202ENST00000452408 1331 ntBASIC18.22■□□□□ 0.51
AP1S1P61966 AC022898.2-201ENST00000616822 1312 ntBASIC18.22■□□□□ 0.51
AP1S1P61966 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
AP1S1P61966 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
AP1S1P61966 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.21■□□□□ 0.51
AP1S1P61966 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
AP1S1P61966 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
AP1S1P61966 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
AP1S1P61966 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.21■□□□□ 0.51
AP1S1P61966 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 DRAXINP1-201ENST00000437611 948 ntBASIC18.21■□□□□ 0.51
AP1S1P61966 AC068472.1-201ENST00000474589 881 ntBASIC18.21■□□□□ 0.51
AP1S1P61966 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.21■□□□□ 0.51
AP1S1P61966 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.21■□□□□ 0.51
AP1S1P61966 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
AP1S1P61966 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.21■□□□□ 0.51
AP1S1P61966 AP002414.4-201ENST00000589764 1148 ntBASIC18.21■□□□□ 0.51
AP1S1P61966 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 AC124864.1-201ENST00000623408 392 ntBASIC18.21■□□□□ 0.51
AP1S1P61966 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.21■□□□□ 0.51
AP1S1P61966 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP1S1P61966 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.2■□□□□ 0.5
AP1S1P61966 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 FLJ13224-201ENST00000313737 1514 ntBASIC18.2■□□□□ 0.5
AP1S1P61966 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
AP1S1P61966 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.2■□□□□ 0.5
AP1S1P61966 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
AP1S1P61966 AL354751.1-201ENST00000412768 1863 ntBASIC18.2■□□□□ 0.5
AP1S1P61966 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP1S1P61966 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP1S1P61966 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
AP1S1P61966 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S1P61966 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
AP1S1P61966 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S1P61966 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 MTCL1P1-201ENST00000446207 792 ntBASIC18.19■□□□□ 0.5
AP1S1P61966 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S1P61966 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.19■□□□□ 0.5
AP1S1P61966 VENTXP7-201ENST00000475503 772 ntBASIC18.19■□□□□ 0.5
AP1S1P61966 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP1S1P61966 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.19■□□□□ 0.5
AP1S1P61966 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.19■□□□□ 0.5
AP1S1P61966 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms