Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.54■□□□□ 0.24
CXCR4P61073 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.54■□□□□ 0.24
CXCR4P61073 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.54■□□□□ 0.24
CXCR4P61073 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.54■□□□□ 0.24
CXCR4P61073 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 AC131212.4-201ENST00000623606 975 ntBASIC16.54■□□□□ 0.24
CXCR4P61073 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 CROCCP2-202ENST00000412962 2773 ntBASIC16.54■□□□□ 0.24
CXCR4P61073 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CXCR4P61073 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.53■□□□□ 0.24
CXCR4P61073 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.53■□□□□ 0.24
CXCR4P61073 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CXCR4P61073 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.53■□□□□ 0.24
CXCR4P61073 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.53■□□□□ 0.24
CXCR4P61073 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.53■□□□□ 0.24
CXCR4P61073 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
CXCR4P61073 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 AL139384.1-201ENST00000612143 3047 ntBASIC16.53■□□□□ 0.24
CXCR4P61073 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.53■□□□□ 0.24
CXCR4P61073 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.53■□□□□ 0.24
CXCR4P61073 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CXCR4P61073 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CXCR4P61073 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.52■□□□□ 0.24
CXCR4P61073 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.52■□□□□ 0.24
CXCR4P61073 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CXCR4P61073 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CXCR4P61073 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CXCR4P61073 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CXCR4P61073 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.52■□□□□ 0.24
CXCR4P61073 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.52■□□□□ 0.24
CXCR4P61073 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CXCR4P61073 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CXCR4P61073 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
CXCR4P61073 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CXCR4P61073 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CXCR4P61073 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CXCR4P61073 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CXCR4P61073 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.52■□□□□ 0.23
CXCR4P61073 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.51■□□□□ 0.23
CXCR4P61073 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CXCR4P61073 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CXCR4P61073 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CXCR4P61073 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CXCR4P61073 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CXCR4P61073 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CXCR4P61073 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CXCR4P61073 AC004980.1-204ENST00000429707 299 ntBASIC16.51■□□□□ 0.23
CXCR4P61073 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.51■□□□□ 0.23
CXCR4P61073 AC090192.1-201ENST00000517740 490 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms