Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SUMO3P55854 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 NOC2LP1-202ENST00000452600 2235 ntBASIC16.4■□□□□ 0.22
SUMO3P55854 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.4■□□□□ 0.22
SUMO3P55854 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 FAM86EP-206ENST00000510506 987 ntBASIC16.4■□□□□ 0.22
SUMO3P55854 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.4■□□□□ 0.22
SUMO3P55854 AC011498.5-201ENST00000592027 486 ntBASIC16.4■□□□□ 0.22
SUMO3P55854 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.4■□□□□ 0.22
SUMO3P55854 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.39■□□□□ 0.22
SUMO3P55854 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
SUMO3P55854 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.39■□□□□ 0.21
SUMO3P55854 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.39■□□□□ 0.21
SUMO3P55854 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 MIR1224-201ENST00000408193 85 ntBASIC16.39■□□□□ 0.21
SUMO3P55854 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.39■□□□□ 0.21
SUMO3P55854 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.39■□□□□ 0.21
SUMO3P55854 KRT18P35-201ENST00000510488 1269 ntBASIC16.39■□□□□ 0.21
SUMO3P55854 KRT8P26-201ENST00000534154 1276 ntBASIC16.39■□□□□ 0.21
SUMO3P55854 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.39■□□□□ 0.21
SUMO3P55854 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.39■□□□□ 0.21
SUMO3P55854 AC010331.1-201ENST00000611423 582 ntBASIC16.39■□□□□ 0.21
SUMO3P55854 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.39■□□□□ 0.21
SUMO3P55854 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SUMO3P55854 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.39■□□□□ 0.21
SUMO3P55854 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.39■□□□□ 0.21
SUMO3P55854 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SUMO3P55854 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SUMO3P55854 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SUMO3P55854 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.38■□□□□ 0.21
SUMO3P55854 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SUMO3P55854 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.38■□□□□ 0.21
SUMO3P55854 TSPY22P-201ENST00000427496 604 ntBASIC16.38■□□□□ 0.21
SUMO3P55854 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SUMO3P55854 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.38■□□□□ 0.21
SUMO3P55854 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.38■□□□□ 0.21
SUMO3P55854 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.38■□□□□ 0.21
SUMO3P55854 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SUMO3P55854 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SUMO3P55854 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.38■□□□□ 0.21
SUMO3P55854 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.38■□□□□ 0.21
SUMO3P55854 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SUMO3P55854 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms