Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PSMD4P55036 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.9■□□□□ 0.3
PSMD4P55036 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PSMD4P55036 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PSMD4P55036 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
PSMD4P55036 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.89■□□□□ 0.29
PSMD4P55036 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PSMD4P55036 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
PSMD4P55036 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
PSMD4P55036 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 TMPOP1-202ENST00000424642 1267 ntBASIC16.89■□□□□ 0.29
PSMD4P55036 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.89■□□□□ 0.29
PSMD4P55036 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.89■□□□□ 0.29
PSMD4P55036 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 ESPNP-201ENST00000270691 2015 ntBASIC16.89■□□□□ 0.29
PSMD4P55036 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PSMD4P55036 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PSMD4P55036 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PSMD4P55036 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 RCN1P1-201ENST00000400413 996 ntBASIC16.88■□□□□ 0.29
PSMD4P55036 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.88■□□□□ 0.29
PSMD4P55036 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.88■□□□□ 0.29
PSMD4P55036 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.88■□□□□ 0.29
PSMD4P55036 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.88■□□□□ 0.29
PSMD4P55036 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.88■□□□□ 0.29
PSMD4P55036 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PSMD4P55036 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PSMD4P55036 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.88■□□□□ 0.29
PSMD4P55036 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.88■□□□□ 0.29
PSMD4P55036 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PSMD4P55036 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PSMD4P55036 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PSMD4P55036 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.87■□□□□ 0.29
PSMD4P55036 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PSMD4P55036 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PSMD4P55036 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PSMD4P55036 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.87■□□□□ 0.29
PSMD4P55036 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PSMD4P55036 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PSMD4P55036 RN7SL850P-201ENST00000579959 291 ntBASIC16.87■□□□□ 0.29
PSMD4P55036 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.87■□□□□ 0.29
PSMD4P55036 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.87■□□□□ 0.29
PSMD4P55036 AC006011.2-201ENST00000621313 1158 ntBASIC16.87■□□□□ 0.29
PSMD4P55036 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms