Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPT1AP50416 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CPT1AP50416 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPT1AP50416 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
CPT1AP50416 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.02■□□□□ 0.79
CPT1AP50416 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CPT1AP50416 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.01■□□□□ 0.79
CPT1AP50416 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.01■□□□□ 0.79
CPT1AP50416 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 FAM197Y3-203ENST00000618346 717 ntBASIC20.01■□□□□ 0.79
CPT1AP50416 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.01■□□□□ 0.79
CPT1AP50416 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
CPT1AP50416 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPT1AP50416 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPT1AP50416 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPT1AP50416 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.01■□□□□ 0.79
CPT1AP50416 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPT1AP50416 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20■□□□□ 0.79
CPT1AP50416 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20■□□□□ 0.79
CPT1AP50416 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20■□□□□ 0.79
CPT1AP50416 AL591424.1-201ENST00000442569 1213 ntBASIC20■□□□□ 0.79
CPT1AP50416 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20■□□□□ 0.79
CPT1AP50416 AC012640.2-201ENST00000561606 901 ntBASIC20■□□□□ 0.79
CPT1AP50416 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20■□□□□ 0.79
CPT1AP50416 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20■□□□□ 0.79
CPT1AP50416 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 AC107918.4-202ENST00000641623 219 ntBASIC20■□□□□ 0.79
CPT1AP50416 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20■□□□□ 0.79
CPT1AP50416 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPT1AP50416 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20■□□□□ 0.79
CPT1AP50416 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20■□□□□ 0.79
CPT1AP50416 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.99■□□□□ 0.79
CPT1AP50416 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.99■□□□□ 0.79
CPT1AP50416 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CPT1AP50416 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 MED15P5-201ENST00000423150 992 ntBASIC19.99■□□□□ 0.79
CPT1AP50416 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.99■□□□□ 0.79
CPT1AP50416 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.99■□□□□ 0.79
CPT1AP50416 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.99■□□□□ 0.79
CPT1AP50416 Z83851.2-201ENST00000609564 659 ntBASIC19.99■□□□□ 0.79
CPT1AP50416 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CPT1AP50416 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CPT1AP50416 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CPT1AP50416 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 AC132938.6-201ENST00000623828 1655 ntBASIC19.99■□□□□ 0.79
CPT1AP50416 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CPT1AP50416 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPT1AP50416 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.98■□□□□ 0.79
CPT1AP50416 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.98■□□□□ 0.79
CPT1AP50416 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.98■□□□□ 0.79
CPT1AP50416 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.98■□□□□ 0.79
CPT1AP50416 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.98■□□□□ 0.79
CPT1AP50416 AC105339.3-201ENST00000560043 636 ntBASIC19.98■□□□□ 0.79
CPT1AP50416 AC034105.1-201ENST00000563488 319 ntBASIC19.98■□□□□ 0.79
CPT1AP50416 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.98■□□□□ 0.79
CPT1AP50416 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPT1AP50416 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CPT1AP50416 AC140113.2-201ENST00000604370 208 ntBASIC19.98■□□□□ 0.79
CPT1AP50416 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms