Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ECHS1P30084 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHS1P30084 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHS1P30084 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHS1P30084 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHS1P30084 AF186192.3-201ENST00000583427 947 ntBASIC18.53■□□□□ 0.56
ECHS1P30084 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHS1P30084 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ECHS1P30084 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHS1P30084 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ECHS1P30084 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ECHS1P30084 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
ECHS1P30084 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHS1P30084 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHS1P30084 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHS1P30084 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHS1P30084 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHS1P30084 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHS1P30084 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHS1P30084 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
ECHS1P30084 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ECHS1P30084 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHS1P30084 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ECHS1P30084 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ECHS1P30084 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHS1P30084 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.52■□□□□ 0.55
ECHS1P30084 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHS1P30084 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.52■□□□□ 0.55
ECHS1P30084 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHS1P30084 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.52■□□□□ 0.55
ECHS1P30084 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ECHS1P30084 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ECHS1P30084 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ECHS1P30084 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHS1P30084 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ECHS1P30084 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
ECHS1P30084 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHS1P30084 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.51■□□□□ 0.55
ECHS1P30084 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ECHS1P30084 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 HLA-J-201ENST00000462773 1622 ntBASIC18.51■□□□□ 0.55
ECHS1P30084 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ECHS1P30084 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ECHS1P30084 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.51■□□□□ 0.55
ECHS1P30084 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHS1P30084 PCDHB19P-201ENST00000570871 2371 ntBASIC18.5■□□□□ 0.55
ECHS1P30084 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHS1P30084 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHS1P30084 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.5■□□□□ 0.55
ECHS1P30084 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.5■□□□□ 0.55
ECHS1P30084 AC073195.1-201ENST00000607241 877 ntBASIC18.5■□□□□ 0.55
ECHS1P30084 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 FSCN1P1-201ENST00000568912 1481 ntBASIC18.5■□□□□ 0.55
ECHS1P30084 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 AC105020.1-201ENST00000435356 2205 ntBASIC18.5■□□□□ 0.55
ECHS1P30084 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHS1P30084 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHS1P30084 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ECHS1P30084 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms