Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.88■□□□□ 0.29
NR4A1P22736 AL353708.3-201ENST00000610272 989 ntBASIC16.88■□□□□ 0.29
NR4A1P22736 AL049637.2-201ENST00000641778 930 ntBASIC16.88■□□□□ 0.29
NR4A1P22736 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR4A1P22736 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.88■□□□□ 0.29
NR4A1P22736 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
NR4A1P22736 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.88■□□□□ 0.29
NR4A1P22736 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.88■□□□□ 0.29
NR4A1P22736 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
NR4A1P22736 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR4A1P22736 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NR4A1P22736 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.87■□□□□ 0.29
NR4A1P22736 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.87■□□□□ 0.29
NR4A1P22736 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.87■□□□□ 0.29
NR4A1P22736 AP002982.1-201ENST00000492365 877 ntBASIC16.87■□□□□ 0.29
NR4A1P22736 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.87■□□□□ 0.29
NR4A1P22736 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.87■□□□□ 0.29
NR4A1P22736 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NR4A1P22736 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR4A1P22736 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
NR4A1P22736 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NR4A1P22736 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NR4A1P22736 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NR4A1P22736 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.86■□□□□ 0.29
NR4A1P22736 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.86■□□□□ 0.29
NR4A1P22736 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.86■□□□□ 0.29
NR4A1P22736 C1QL1P1-201ENST00000568105 661 ntBASIC16.86■□□□□ 0.29
NR4A1P22736 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR4A1P22736 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NR4A1P22736 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 REXO1L9P-201ENST00000604264 2108 ntBASIC16.85■□□□□ 0.29
NR4A1P22736 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.85■□□□□ 0.29
NR4A1P22736 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NR4A1P22736 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NR4A1P22736 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
NR4A1P22736 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.85■□□□□ 0.29
NR4A1P22736 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.85■□□□□ 0.29
NR4A1P22736 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.85■□□□□ 0.29
NR4A1P22736 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NR4A1P22736 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.85■□□□□ 0.29
NR4A1P22736 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.85■□□□□ 0.29
NR4A1P22736 AC073195.1-201ENST00000607241 877 ntBASIC16.85■□□□□ 0.29
NR4A1P22736 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
NR4A1P22736 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms