Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.23□□□□□ -0.61
PDE6GP18545 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC11.23□□□□□ -0.61
PDE6GP18545 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC11.23□□□□□ -0.61
PDE6GP18545 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
PDE6GP18545 GOLGA6L3-201ENST00000507199 1679 ntBASIC11.23□□□□□ -0.61
PDE6GP18545 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC11.23□□□□□ -0.61
PDE6GP18545 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.23□□□□□ -0.61
PDE6GP18545 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PDE6GP18545 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC11.23□□□□□ -0.61
PDE6GP18545 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.23□□□□□ -0.61
PDE6GP18545 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.23□□□□□ -0.61
PDE6GP18545 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PDE6GP18545 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.23□□□□□ -0.61
PDE6GP18545 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.23□□□□□ -0.61
PDE6GP18545 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
PDE6GP18545 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.23□□□□□ -0.61
PDE6GP18545 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
PDE6GP18545 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 CICP6-201ENST00000457191 2729 ntBASIC11.22□□□□□ -0.61
PDE6GP18545 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PDE6GP18545 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 AC097376.2-205ENST00000610159 5334 ntBASIC11.22□□□□□ -0.61
PDE6GP18545 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC11.22□□□□□ -0.61
PDE6GP18545 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC11.22□□□□□ -0.61
PDE6GP18545 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 YBX1P10-201ENST00000444752 975 ntBASIC11.22□□□□□ -0.61
PDE6GP18545 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 GMCL1P1-201ENST00000463439 1581 ntBASIC11.22□□□□□ -0.61
PDE6GP18545 AC009299.2-201ENST00000482477 511 ntBASIC11.22□□□□□ -0.61
PDE6GP18545 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC11.22□□□□□ -0.61
PDE6GP18545 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PDE6GP18545 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
PDE6GP18545 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC11.22□□□□□ -0.61
PDE6GP18545 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC11.22□□□□□ -0.61
PDE6GP18545 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC11.22□□□□□ -0.61
PDE6GP18545 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PDE6GP18545 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
PDE6GP18545 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PDE6GP18545 AL596257.1-201ENST00000641463 2694 ntBASIC11.22□□□□□ -0.61
PDE6GP18545 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PDE6GP18545 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
PDE6GP18545 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PDE6GP18545 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
PDE6GP18545 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PDE6GP18545 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
PDE6GP18545 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.21□□□□□ -0.61
PDE6GP18545 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.21□□□□□ -0.61
PDE6GP18545 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PDE6GP18545 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC11.21□□□□□ -0.61
PDE6GP18545 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
PDE6GP18545 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms