Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDGFRAP16234 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
PDGFRAP16234 HLA-F-220ENST00000434407 884 ntBASIC19.03■□□□□ 0.64
PDGFRAP16234 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PDGFRAP16234 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFRAP16234 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFRAP16234 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFRAP16234 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.02■□□□□ 0.64
PDGFRAP16234 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.02■□□□□ 0.64
PDGFRAP16234 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.02■□□□□ 0.64
PDGFRAP16234 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.02■□□□□ 0.64
PDGFRAP16234 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFRAP16234 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.02■□□□□ 0.64
PDGFRAP16234 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFRAP16234 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFRAP16234 AC024563.2-201ENST00000603282 481 ntBASIC19.02■□□□□ 0.64
PDGFRAP16234 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.02■□□□□ 0.64
PDGFRAP16234 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFRAP16234 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFRAP16234 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFRAP16234 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFRAP16234 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.02■□□□□ 0.63
PDGFRAP16234 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFRAP16234 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFRAP16234 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFRAP16234 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFRAP16234 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 FLJ13224-201ENST00000313737 1514 ntBASIC19.01■□□□□ 0.63
PDGFRAP16234 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.01■□□□□ 0.63
PDGFRAP16234 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 AP000997.3-201ENST00000623333 2250 ntBASIC19.01■□□□□ 0.63
PDGFRAP16234 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.01■□□□□ 0.63
PDGFRAP16234 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.01■□□□□ 0.63
PDGFRAP16234 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.01■□□□□ 0.63
PDGFRAP16234 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 HYMAI.1-201ENST00000620949 238 ntBASIC19.01■□□□□ 0.63
PDGFRAP16234 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.01■□□□□ 0.63
PDGFRAP16234 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PDGFRAP16234 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PDGFRAP16234 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.01■□□□□ 0.63
PDGFRAP16234 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PDGFRAP16234 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFRAP16234 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19■□□□□ 0.63
PDGFRAP16234 LINC01311-201ENST00000565162 1445 ntBASIC19■□□□□ 0.63
PDGFRAP16234 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms