Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC30.86■■■□□ 2.53
CFTRP13569 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC30.86■■■□□ 2.53
CFTRP13569 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CFTRP13569 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CFTRP13569 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC30.86■■■□□ 2.53
CFTRP13569 POLD4-207ENST00000531239 584 ntTSL 2 BASIC30.86■■■□□ 2.53
CFTRP13569 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC30.86■■■□□ 2.53
CFTRP13569 CYB561-217ENST00000582997 877 ntTSL 5 BASIC30.86■■■□□ 2.53
CFTRP13569 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC30.86■■■□□ 2.53
CFTRP13569 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC30.86■■■□□ 2.53
CFTRP13569 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
CFTRP13569 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC30.85■■■□□ 2.53
CFTRP13569 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC30.85■■■□□ 2.53
CFTRP13569 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CFTRP13569 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CFTRP13569 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC30.85■■■□□ 2.53
CFTRP13569 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC30.85■■■□□ 2.53
CFTRP13569 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC30.84■■■□□ 2.53
CFTRP13569 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC30.84■■■□□ 2.53
CFTRP13569 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC30.84■■■□□ 2.53
CFTRP13569 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC30.84■■■□□ 2.53
CFTRP13569 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC30.84■■■□□ 2.53
CFTRP13569 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CFTRP13569 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
CFTRP13569 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC30.84■■■□□ 2.53
CFTRP13569 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
CFTRP13569 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC30.83■■■□□ 2.53
CFTRP13569 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 AL513210.1-201ENST00000629608 234 ntBASIC30.83■■■□□ 2.53
CFTRP13569 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC30.83■■■□□ 2.53
CFTRP13569 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC30.83■■■□□ 2.53
CFTRP13569 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 AC132938.5-201ENST00000624980 1813 ntBASIC30.83■■■□□ 2.53
CFTRP13569 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CFTRP13569 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC30.83■■■□□ 2.53
CFTRP13569 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
CFTRP13569 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
CFTRP13569 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC30.82■■■□□ 2.53
CFTRP13569 AL020989.1-201ENST00000422979 469 ntBASIC30.82■■■□□ 2.53
CFTRP13569 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC30.82■■■□□ 2.53
CFTRP13569 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
CFTRP13569 PC-214ENST00000628663 1470 ntTSL 5 BASIC30.82■■■□□ 2.52
CFTRP13569 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CFTRP13569 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CFTRP13569 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CFTRP13569 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CFTRP13569 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CFTRP13569 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC30.82■■■□□ 2.52
CFTRP13569 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC30.82■■■□□ 2.52
CFTRP13569 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC30.82■■■□□ 2.52
CFTRP13569 RHOQP3-201ENST00000437982 621 ntBASIC30.82■■■□□ 2.52
CFTRP13569 KRT19P2-202ENST00000557173 1012 ntBASIC30.82■■■□□ 2.52
CFTRP13569 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
CFTRP13569 AC004790.2-201ENST00000623588 572 ntBASIC30.82■■■□□ 2.52
CFTRP13569 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CFTRP13569 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC30.81■■■□□ 2.52
CFTRP13569 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC30.81■■■□□ 2.52
CFTRP13569 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CFTRP13569 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CFTRP13569 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CFTRP13569 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CFTRP13569 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CFTRP13569 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC30.81■■■□□ 2.52
CFTRP13569 OR7E47P-204ENST00000575924 449 ntBASIC30.81■■■□□ 2.52
CFTRP13569 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC30.81■■■□□ 2.52
CFTRP13569 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC30.81■■■□□ 2.52
CFTRP13569 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CFTRP13569 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
CFTRP13569 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
CFTRP13569 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
CFTRP13569 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CFTRP13569 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC30.8■■■□□ 2.52
CFTRP13569 CBR1-202ENST00000399191 838 ntTSL 3 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms