Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BMP3P12645 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
BMP3P12645 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BMP3P12645 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.84■□□□□ 0.93
BMP3P12645 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
BMP3P12645 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 AC106795.1-205ENST00000512851 1056 ntBASIC20.84■□□□□ 0.93
BMP3P12645 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.84■□□□□ 0.93
BMP3P12645 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 SLC25A6P4-201ENST00000586535 553 ntBASIC20.84■□□□□ 0.93
BMP3P12645 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.84■□□□□ 0.93
BMP3P12645 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.84■□□□□ 0.93
BMP3P12645 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
BMP3P12645 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.84■□□□□ 0.93
BMP3P12645 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BMP3P12645 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BMP3P12645 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
BMP3P12645 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BMP3P12645 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
BMP3P12645 TNXA-203ENST00000507684 2038 ntBASIC20.83■□□□□ 0.93
BMP3P12645 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BMP3P12645 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
BMP3P12645 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.83■□□□□ 0.93
BMP3P12645 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BMP3P12645 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
BMP3P12645 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
BMP3P12645 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.83■□□□□ 0.93
BMP3P12645 MRPL3P1-201ENST00000400109 1033 ntBASIC20.83■□□□□ 0.93
BMP3P12645 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BMP3P12645 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BMP3P12645 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.83■□□□□ 0.93
BMP3P12645 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BMP3P12645 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.83■□□□□ 0.93
BMP3P12645 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.83■□□□□ 0.93
BMP3P12645 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.83■□□□□ 0.93
BMP3P12645 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
BMP3P12645 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
BMP3P12645 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.83■□□□□ 0.92
BMP3P12645 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
BMP3P12645 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
BMP3P12645 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.83■□□□□ 0.92
BMP3P12645 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.83■□□□□ 0.92
BMP3P12645 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
BMP3P12645 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.83■□□□□ 0.92
BMP3P12645 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
BMP3P12645 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
BMP3P12645 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.82■□□□□ 0.92
BMP3P12645 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
BMP3P12645 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.82■□□□□ 0.92
BMP3P12645 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BMP3P12645 TP73-AS1-207ENST00000624167 988 ntBASIC20.82■□□□□ 0.92
BMP3P12645 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BMP3P12645 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
BMP3P12645 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms