Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.93■□□□□ 0.3
TPRP12270 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.93■□□□□ 0.3
TPRP12270 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TPRP12270 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TPRP12270 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.93■□□□□ 0.3
TPRP12270 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.92■□□□□ 0.3
TPRP12270 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
TPRP12270 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPRP12270 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.92■□□□□ 0.3
TPRP12270 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TPRP12270 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.92■□□□□ 0.3
TPRP12270 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.92■□□□□ 0.3
TPRP12270 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.92■□□□□ 0.3
TPRP12270 ZNF815P-204ENST00000434898 1737 ntBASIC16.92■□□□□ 0.3
TPRP12270 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.92■□□□□ 0.3
TPRP12270 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TPRP12270 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.92■□□□□ 0.3
TPRP12270 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 SDHAP1-207ENST00000440850 2000 ntBASIC16.92■□□□□ 0.3
TPRP12270 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.92■□□□□ 0.3
TPRP12270 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.92■□□□□ 0.3
TPRP12270 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TPRP12270 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.92■□□□□ 0.3
TPRP12270 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.92■□□□□ 0.3
TPRP12270 AL022326.1-202ENST00000641533 845 ntBASIC16.92■□□□□ 0.3
TPRP12270 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.92■□□□□ 0.3
TPRP12270 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
TPRP12270 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TPRP12270 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TPRP12270 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TPRP12270 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.91■□□□□ 0.3
TPRP12270 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.91■□□□□ 0.3
TPRP12270 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.91■□□□□ 0.3
TPRP12270 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TPRP12270 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TPRP12270 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.91■□□□□ 0.3
TPRP12270 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.91■□□□□ 0.3
TPRP12270 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.91■□□□□ 0.3
TPRP12270 AC004877.2-201ENST00000623941 599 ntBASIC16.91■□□□□ 0.3
TPRP12270 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
TPRP12270 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
TPRP12270 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPRP12270 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.9■□□□□ 0.3
TPRP12270 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms