Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
UBCP0CG48 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 AL355355.2-201ENST00000442321 338 ntBASIC15.92■□□□□ 0.14
UBCP0CG48 UBE2SP1-201ENST00000450587 669 ntBASIC15.92■□□□□ 0.14
UBCP0CG48 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 REXO1L10P-201ENST00000615707 1290 ntBASIC15.92■□□□□ 0.14
UBCP0CG48 REXO1L12P-201ENST00000622156 912 ntBASIC15.92■□□□□ 0.14
UBCP0CG48 AC093010.1-201ENST00000473625 1624 ntBASIC15.92■□□□□ 0.14
UBCP0CG48 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.92■□□□□ 0.14
UBCP0CG48 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
UBCP0CG48 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UBCP0CG48 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 SLC25A1P2-201ENST00000430693 912 ntBASIC15.91■□□□□ 0.14
UBCP0CG48 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.91■□□□□ 0.14
UBCP0CG48 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.91■□□□□ 0.14
UBCP0CG48 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.91■□□□□ 0.14
UBCP0CG48 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.91■□□□□ 0.14
UBCP0CG48 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
UBCP0CG48 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
UBCP0CG48 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UBCP0CG48 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.9■□□□□ 0.14
UBCP0CG48 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
UBCP0CG48 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.9■□□□□ 0.14
UBCP0CG48 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 TSPY17P-201ENST00000450329 467 ntBASIC15.9■□□□□ 0.14
UBCP0CG48 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.9■□□□□ 0.14
UBCP0CG48 AC142381.4-202ENST00000563973 229 ntBASIC15.9■□□□□ 0.14
UBCP0CG48 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 AC233702.5-201ENST00000584107 538 ntBASIC15.9■□□□□ 0.14
UBCP0CG48 AC113410.3-201ENST00000623366 203 ntBASIC15.9■□□□□ 0.14
UBCP0CG48 AL049637.2-201ENST00000641778 930 ntBASIC15.9■□□□□ 0.14
UBCP0CG48 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.9■□□□□ 0.14
UBCP0CG48 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UBCP0CG48 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBCP0CG48 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms