Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.39■■□□□ 1.01
HMGB1P09429 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGB1P09429 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGB1P09429 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGB1P09429 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGB1P09429 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGB1P09429 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGB1P09429 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HMGB1P09429 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 LINC00602-201ENST00000629776 2065 ntBASIC21.38■■□□□ 1.01
HMGB1P09429 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGB1P09429 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGB1P09429 KRT18P48-201ENST00000434763 852 ntBASIC21.38■■□□□ 1.01
HMGB1P09429 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HMGB1P09429 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGB1P09429 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.38■■□□□ 1.01
HMGB1P09429 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGB1P09429 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HMGB1P09429 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
HMGB1P09429 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
HMGB1P09429 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
HMGB1P09429 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGB1P09429 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGB1P09429 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGB1P09429 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGB1P09429 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 GNAS-203ENST00000306120 1878 ntBASIC21.37■■□□□ 1.01
HMGB1P09429 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
HMGB1P09429 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HMGB1P09429 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.37■■□□□ 1.01
HMGB1P09429 AC104076.2-201ENST00000448912 469 ntBASIC21.37■■□□□ 1.01
HMGB1P09429 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.37■■□□□ 1.01
HMGB1P09429 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.37■■□□□ 1.01
HMGB1P09429 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.37■■□□□ 1.01
HMGB1P09429 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGB1P09429 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGB1P09429 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HMGB1P09429 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HMGB1P09429 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGB1P09429 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HMGB1P09429 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGB1P09429 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HMGB1P09429 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGB1P09429 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HMGB1P09429 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGB1P09429 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGB1P09429 HBZP1-201ENST00000354915 429 ntBASIC21.36■■□□□ 1.01
HMGB1P09429 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 RCN1P1-201ENST00000400413 996 ntBASIC21.36■■□□□ 1.01
HMGB1P09429 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGB1P09429 AC092647.4-201ENST00000457211 535 ntBASIC21.36■■□□□ 1.01
HMGB1P09429 AC092597.1-201ENST00000487352 616 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms