Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
THBS1P07996 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
THBS1P07996 AC005521.1-201ENST00000393351 872 ntBASIC16.7■□□□□ 0.26
THBS1P07996 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
THBS1P07996 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS1P07996 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS1P07996 KRT18P35-201ENST00000510488 1269 ntBASIC16.7■□□□□ 0.26
THBS1P07996 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.7■□□□□ 0.26
THBS1P07996 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.7■□□□□ 0.26
THBS1P07996 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
THBS1P07996 AL138966.2-201ENST00000621997 464 ntBASIC16.7■□□□□ 0.26
THBS1P07996 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
THBS1P07996 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
THBS1P07996 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.7■□□□□ 0.26
THBS1P07996 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
THBS1P07996 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
THBS1P07996 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 AC006116.8-202ENST00000587620 1550 ntBASIC16.69■□□□□ 0.26
THBS1P07996 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
THBS1P07996 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
THBS1P07996 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.69■□□□□ 0.26
THBS1P07996 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.69■□□□□ 0.26
THBS1P07996 AC034232.1-201ENST00000506026 1064 ntBASIC16.69■□□□□ 0.26
THBS1P07996 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.69■□□□□ 0.26
THBS1P07996 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS1P07996 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
THBS1P07996 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.69■□□□□ 0.26
THBS1P07996 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
THBS1P07996 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
THBS1P07996 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
THBS1P07996 AC132938.6-201ENST00000623828 1655 ntBASIC16.69■□□□□ 0.26
THBS1P07996 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
THBS1P07996 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.68■□□□□ 0.26
THBS1P07996 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.68■□□□□ 0.26
THBS1P07996 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
THBS1P07996 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
THBS1P07996 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.68■□□□□ 0.26
THBS1P07996 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.68■□□□□ 0.26
THBS1P07996 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.68■□□□□ 0.26
THBS1P07996 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.68■□□□□ 0.26
THBS1P07996 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.68■□□□□ 0.26
THBS1P07996 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.68■□□□□ 0.26
THBS1P07996 AL157888.1-201ENST00000631930 593 ntBASIC16.68■□□□□ 0.26
THBS1P07996 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
THBS1P07996 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
THBS1P07996 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
THBS1P07996 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
THBS1P07996 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
THBS1P07996 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.67■□□□□ 0.26
THBS1P07996 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.67■□□□□ 0.26
THBS1P07996 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
THBS1P07996 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
THBS1P07996 TERF1P1-201ENST00000311003 1181 ntBASIC16.67■□□□□ 0.26
THBS1P07996 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
THBS1P07996 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.67■□□□□ 0.26
THBS1P07996 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.67■□□□□ 0.26
THBS1P07996 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.67■□□□□ 0.26
THBS1P07996 AC113404.2-201ENST00000507884 177 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms