Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN1P07384 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN1P07384 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN1P07384 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CAPN1P07384 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 REXO1L9P-201ENST00000604264 2108 ntBASIC17.86■□□□□ 0.45
CAPN1P07384 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN1P07384 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN1P07384 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN1P07384 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CAPN1P07384 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CAPN1P07384 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
CAPN1P07384 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CAPN1P07384 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CAPN1P07384 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CAPN1P07384 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CAPN1P07384 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CAPN1P07384 AL359075.1-203ENST00000462729 1002 ntBASIC17.85■□□□□ 0.45
CAPN1P07384 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CAPN1P07384 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPN1P07384 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CAPN1P07384 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.85■□□□□ 0.45
CAPN1P07384 NEK4P2-201ENST00000580004 1012 ntBASIC17.85■□□□□ 0.45
CAPN1P07384 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CAPN1P07384 AC091076.1-201ENST00000610741 619 ntBASIC17.85■□□□□ 0.45
CAPN1P07384 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN1P07384 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CAPN1P07384 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CAPN1P07384 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN1P07384 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 AC036111.1-201ENST00000533973 1582 ntBASIC17.84■□□□□ 0.45
CAPN1P07384 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CAPN1P07384 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN1P07384 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN1P07384 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN1P07384 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 FAM86EP-206ENST00000510506 987 ntBASIC17.84■□□□□ 0.45
CAPN1P07384 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN1P07384 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN1P07384 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CAPN1P07384 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 CR769767.2-201ENST00000622735 460 ntBASIC17.84■□□□□ 0.45
CAPN1P07384 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CAPN1P07384 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CAPN1P07384 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN1P07384 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CAPN1P07384 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CAPN1P07384 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.83■□□□□ 0.45
CAPN1P07384 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN1P07384 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 AC106820.2-201ENST00000563775 3264 ntBASIC17.83■□□□□ 0.44
CAPN1P07384 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN1P07384 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms