Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC010947.1-201ENST00000623454 693 ntBASIC18.5■□□□□ 0.55
MT-ND3P03897 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MT-ND3P03897 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-ND3P03897 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
MT-ND3P03897 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MT-ND3P03897 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MT-ND3P03897 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MT-ND3P03897 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-ND3P03897 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MT-ND3P03897 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
MT-ND3P03897 AL137013.1-201ENST00000432946 1228 ntBASIC18.49■□□□□ 0.55
MT-ND3P03897 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 AL590326.2-201ENST00000625139 305 ntBASIC18.49■□□□□ 0.55
MT-ND3P03897 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.49■□□□□ 0.55
MT-ND3P03897 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MT-ND3P03897 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.49■□□□□ 0.55
MT-ND3P03897 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 AC012313.1-201ENST00000593393 3059 ntBASIC18.49■□□□□ 0.55
MT-ND3P03897 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND3P03897 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.49■□□□□ 0.55
MT-ND3P03897 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MT-ND3P03897 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND3P03897 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 PRORSD1P-202ENST00000563365 2154 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND3P03897 CYP2D8P-201ENST00000433633 1490 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 AC005521.1-201ENST00000393351 872 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.48■□□□□ 0.55
MT-ND3P03897 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 AC004951.3-201ENST00000418645 1148 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.48■□□□□ 0.55
MT-ND3P03897 AC128688.1-201ENST00000487626 519 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 AL049597.2-201ENST00000565575 961 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.48■□□□□ 0.55
MT-ND3P03897 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MT-ND3P03897 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND3P03897 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 AL096828.2-201ENST00000567259 1965 ntBASIC18.48■□□□□ 0.55
MT-ND3P03897 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND3P03897 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND3P03897 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND3P03897 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MT-ND3P03897 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND3P03897 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 AL109659.2-201ENST00000606809 1674 ntBASIC18.47■□□□□ 0.55
MT-ND3P03897 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND3P03897 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms