Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
MT-ND1P03886 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND1P03886 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-ND1P03886 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-ND1P03886 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 RPS2P4-201ENST00000476944 856 ntBASIC17.13■□□□□ 0.33
MT-ND1P03886 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND1P03886 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND1P03886 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MT-ND1P03886 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-ND1P03886 NKILA-202ENST00000614771 2598 ntBASIC17.13■□□□□ 0.33
MT-ND1P03886 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-ND1P03886 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-ND1P03886 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND1P03886 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND1P03886 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND1P03886 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-ND1P03886 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.12■□□□□ 0.33
MT-ND1P03886 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
MT-ND1P03886 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
MT-ND1P03886 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-ND1P03886 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-ND1P03886 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MT-ND1P03886 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-ND1P03886 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MT-ND1P03886 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND1P03886 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.11■□□□□ 0.33
MT-ND1P03886 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 AC091390.4-202ENST00000476426 537 ntBASIC17.11■□□□□ 0.33
MT-ND1P03886 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.11■□□□□ 0.33
MT-ND1P03886 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND1P03886 MIR4651-201ENST00000582622 73 ntBASIC17.11■□□□□ 0.33
MT-ND1P03886 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND1P03886 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.11■□□□□ 0.33
MT-ND1P03886 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MT-ND1P03886 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND1P03886 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-ND1P03886 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-ND1P03886 KRT16P1-201ENST00000399124 1418 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms