Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-AP01891 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.32■□□□□ 0.04
HLA-AP01891 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.32■□□□□ 0.04
HLA-AP01891 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-AP01891 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HLA-AP01891 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-AP01891 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-AP01891 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HLA-AP01891 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
HLA-AP01891 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.31■□□□□ 0.04
HLA-AP01891 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
HLA-AP01891 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.31■□□□□ 0.04
HLA-AP01891 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HLA-AP01891 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HLA-AP01891 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HLA-AP01891 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
HLA-AP01891 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HLA-AP01891 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HLA-AP01891 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 GMCL1P1-201ENST00000463439 1581 ntBASIC15.3■□□□□ 0.04
HLA-AP01891 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-AP01891 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-AP01891 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.3■□□□□ 0.04
HLA-AP01891 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-AP01891 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-AP01891 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms