Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.14■□□□□ 0.49
PDGFBP01127 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDGFBP01127 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.14■□□□□ 0.49
PDGFBP01127 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.14■□□□□ 0.49
PDGFBP01127 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.14■□□□□ 0.49
PDGFBP01127 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.14■□□□□ 0.49
PDGFBP01127 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.14■□□□□ 0.49
PDGFBP01127 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.14■□□□□ 0.49
PDGFBP01127 AC004790.2-201ENST00000623588 572 ntBASIC18.14■□□□□ 0.49
PDGFBP01127 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.14■□□□□ 0.49
PDGFBP01127 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.14■□□□□ 0.49
PDGFBP01127 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDGFBP01127 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.13■□□□□ 0.49
PDGFBP01127 IGLL3P-201ENST00000412472 434 ntBASIC18.13■□□□□ 0.49
PDGFBP01127 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.13■□□□□ 0.49
PDGFBP01127 AC015922.1-201ENST00000421102 1152 ntBASIC18.13■□□□□ 0.49
PDGFBP01127 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.13■□□□□ 0.49
PDGFBP01127 AP000344.2-201ENST00000512987 629 ntBASIC18.13■□□□□ 0.49
PDGFBP01127 AC190387.1-201ENST00000551683 408 ntBASIC18.13■□□□□ 0.49
PDGFBP01127 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.13■□□□□ 0.49
PDGFBP01127 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.13■□□□□ 0.49
PDGFBP01127 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDGFBP01127 AC141586.3-201ENST00000562166 1838 ntBASIC18.13■□□□□ 0.49
PDGFBP01127 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDGFBP01127 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDGFBP01127 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDGFBP01127 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDGFBP01127 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDGFBP01127 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.12■□□□□ 0.49
PDGFBP01127 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.12■□□□□ 0.49
PDGFBP01127 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.12■□□□□ 0.49
PDGFBP01127 FAM58CP-201ENST00000435741 640 ntBASIC18.12■□□□□ 0.49
PDGFBP01127 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 AC109322.1-201ENST00000524499 1264 ntBASIC18.12■□□□□ 0.49
PDGFBP01127 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.12■□□□□ 0.49
PDGFBP01127 PDPK2P-202ENST00000562415 1191 ntBASIC18.12■□□□□ 0.49
PDGFBP01127 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.12■□□□□ 0.49
PDGFBP01127 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.12■□□□□ 0.49
PDGFBP01127 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.12■□□□□ 0.49
PDGFBP01127 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.12■□□□□ 0.49
PDGFBP01127 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDGFBP01127 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PDGFBP01127 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.11■□□□□ 0.49
PDGFBP01127 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.11■□□□□ 0.49
PDGFBP01127 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PDGFBP01127 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.11■□□□□ 0.49
PDGFBP01127 PRYP5-201ENST00000451909 266 ntBASIC18.11■□□□□ 0.49
PDGFBP01127 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.11■□□□□ 0.49
PDGFBP01127 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.11■□□□□ 0.49
PDGFBP01127 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.11■□□□□ 0.49
PDGFBP01127 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.11■□□□□ 0.49
PDGFBP01127 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.11■□□□□ 0.49
PDGFBP01127 AC004706.3-202ENST00000621574 984 ntBASIC18.11■□□□□ 0.49
PDGFBP01127 AC004877.2-201ENST00000623941 599 ntBASIC18.11■□□□□ 0.49
PDGFBP01127 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDGFBP01127 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDGFBP01127 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDGFBP01127 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms