Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CLN5O75503 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN5O75503 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.83□□□□□ -0.04
CLN5O75503 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 AL645608.8-201ENST00000606034 2086 ntBASIC14.83□□□□□ -0.04
CLN5O75503 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLN5O75503 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN5O75503 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN5O75503 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 AC239809.2-201ENST00000415381 517 ntBASIC14.82□□□□□ -0.04
CLN5O75503 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLN5O75503 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN5O75503 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN5O75503 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLN5O75503 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 LINC00554-201ENST00000564841 3011 ntBASIC14.82□□□□□ -0.04
CLN5O75503 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN5O75503 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN5O75503 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN5O75503 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN5O75503 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN5O75503 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN5O75503 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN5O75503 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 KRT16P5-201ENST00000455284 522 ntBASIC14.81□□□□□ -0.04
CLN5O75503 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN5O75503 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN5O75503 AL023875.1-201ENST00000640777 796 ntBASIC14.81□□□□□ -0.04
CLN5O75503 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN5O75503 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN5O75503 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLN5O75503 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN5O75503 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN5O75503 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms