Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.6■□□□□ 0.41
CNOT3O75175 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.6■□□□□ 0.41
CNOT3O75175 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 KRT8P32-201ENST00000512863 1461 ntBASIC17.6■□□□□ 0.41
CNOT3O75175 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNOT3O75175 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT3O75175 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CNOT3O75175 FP475955.4-201ENST00000623131 1990 ntBASIC17.6■□□□□ 0.41
CNOT3O75175 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT3O75175 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNOT3O75175 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT3O75175 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNOT3O75175 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.59■□□□□ 0.41
CNOT3O75175 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.59■□□□□ 0.41
CNOT3O75175 VENTXP5-201ENST00000523979 775 ntBASIC17.59■□□□□ 0.41
CNOT3O75175 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.59■□□□□ 0.41
CNOT3O75175 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CNOT3O75175 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 AC068880.1-201ENST00000507289 2297 ntBASIC17.59■□□□□ 0.41
CNOT3O75175 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT3O75175 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT3O75175 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT3O75175 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.58■□□□□ 0.41
CNOT3O75175 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.58■□□□□ 0.41
CNOT3O75175 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT3O75175 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CNOT3O75175 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.58■□□□□ 0.41
CNOT3O75175 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT3O75175 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CNOT3O75175 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.58■□□□□ 0.4
CNOT3O75175 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.58■□□□□ 0.4
CNOT3O75175 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.58■□□□□ 0.4
CNOT3O75175 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.58■□□□□ 0.4
CNOT3O75175 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CNOT3O75175 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.58■□□□□ 0.4
CNOT3O75175 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT3O75175 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNOT3O75175 WIZP1-201ENST00000531444 2299 ntBASIC17.58■□□□□ 0.4
CNOT3O75175 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT3O75175 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms