Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.11■□□□□ 0.33
PLOD3O60568 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
PLOD3O60568 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PLOD3O60568 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
PLOD3O60568 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PLOD3O60568 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.1■□□□□ 0.33
PLOD3O60568 AC034232.1-201ENST00000506026 1064 ntBASIC17.1■□□□□ 0.33
PLOD3O60568 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.1■□□□□ 0.33
PLOD3O60568 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PLOD3O60568 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PLOD3O60568 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.1■□□□□ 0.33
PLOD3O60568 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.1■□□□□ 0.33
PLOD3O60568 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PLOD3O60568 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.1■□□□□ 0.33
PLOD3O60568 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PLOD3O60568 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PLOD3O60568 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.1■□□□□ 0.33
PLOD3O60568 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.09■□□□□ 0.33
PLOD3O60568 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.09■□□□□ 0.33
PLOD3O60568 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 AC099343.3-201ENST00000605834 2503 ntBASIC17.09■□□□□ 0.33
PLOD3O60568 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.09■□□□□ 0.33
PLOD3O60568 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.09■□□□□ 0.33
PLOD3O60568 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.09■□□□□ 0.33
PLOD3O60568 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.09■□□□□ 0.33
PLOD3O60568 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.09■□□□□ 0.33
PLOD3O60568 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PLOD3O60568 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PLOD3O60568 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.09■□□□□ 0.33
PLOD3O60568 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PLOD3O60568 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PLOD3O60568 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PLOD3O60568 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.08■□□□□ 0.33
PLOD3O60568 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PLOD3O60568 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.08■□□□□ 0.33
PLOD3O60568 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.08■□□□□ 0.33
PLOD3O60568 AL024508.2-201ENST00000607749 1894 ntBASIC17.08■□□□□ 0.33
PLOD3O60568 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PLOD3O60568 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PLOD3O60568 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PLOD3O60568 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PLOD3O60568 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PLOD3O60568 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PLOD3O60568 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PLOD3O60568 PVRIG2P-201ENST00000435460 978 ntBASIC17.08■□□□□ 0.32
PLOD3O60568 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PLOD3O60568 YBX1P2-201ENST00000489612 999 ntBASIC17.08■□□□□ 0.32
PLOD3O60568 AL441883.1-201ENST00000566170 1045 ntBASIC17.08■□□□□ 0.32
PLOD3O60568 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
PLOD3O60568 AC011558.1-201ENST00000623459 338 ntBASIC17.08■□□□□ 0.32
PLOD3O60568 AL157888.1-201ENST00000631930 593 ntBASIC17.08■□□□□ 0.32
PLOD3O60568 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PLOD3O60568 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms