Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDH7O60245 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH7O60245 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH7O60245 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 GNAS-203ENST00000306120 1878 ntBASIC17.33■□□□□ 0.37
PCDH7O60245 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PCDH7O60245 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.37
PCDH7O60245 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PCDH7O60245 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH7O60245 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDH7O60245 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 SLC25A3P1-201ENST00000443844 931 ntBASIC17.33■□□□□ 0.36
PCDH7O60245 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH7O60245 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDH7O60245 AC141257.4-201ENST00000634557 245 ntBASIC17.33■□□□□ 0.36
PCDH7O60245 AC136944.6-201ENST00000634818 245 ntBASIC17.33■□□□□ 0.36
PCDH7O60245 AC134043.2-201ENST00000624206 2238 ntBASIC17.33■□□□□ 0.36
PCDH7O60245 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH7O60245 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PCDH7O60245 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH7O60245 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PCDH7O60245 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDH7O60245 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH7O60245 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDH7O60245 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDH7O60245 AL157888.1-201ENST00000631930 593 ntBASIC17.32■□□□□ 0.36
PCDH7O60245 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDH7O60245 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH7O60245 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH7O60245 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.32■□□□□ 0.36
PCDH7O60245 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH7O60245 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH7O60245 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH7O60245 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH7O60245 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH7O60245 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDH7O60245 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PCDH7O60245 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH7O60245 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH7O60245 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDH7O60245 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH7O60245 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.31■□□□□ 0.36
PCDH7O60245 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH7O60245 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH7O60245 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PCDH7O60245 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH7O60245 AL138966.2-201ENST00000621997 464 ntBASIC17.31■□□□□ 0.36
PCDH7O60245 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH7O60245 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms