Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC083906.2-201ENST00000511578 360 ntBASIC14.82□□□□□ -0.04
SSSCA1O60232 KRT18P41-201ENST00000518924 1277 ntBASIC14.82□□□□□ -0.04
SSSCA1O60232 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.82□□□□□ -0.04
SSSCA1O60232 MIR4758-201ENST00000577688 71 ntBASIC14.82□□□□□ -0.04
SSSCA1O60232 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSSCA1O60232 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SSSCA1O60232 AC099343.3-201ENST00000605834 2503 ntBASIC14.82□□□□□ -0.04
SSSCA1O60232 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SSSCA1O60232 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.82□□□□□ -0.04
SSSCA1O60232 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SSSCA1O60232 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSSCA1O60232 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
SSSCA1O60232 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SSSCA1O60232 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.81□□□□□ -0.04
SSSCA1O60232 AL162430.1-201ENST00000480705 870 ntBASIC14.81□□□□□ -0.04
SSSCA1O60232 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSSCA1O60232 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.81□□□□□ -0.04
SSSCA1O60232 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.81□□□□□ -0.04
SSSCA1O60232 AC022517.1-201ENST00000592429 346 ntBASIC14.81□□□□□ -0.04
SSSCA1O60232 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SSSCA1O60232 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSSCA1O60232 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SSSCA1O60232 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSSCA1O60232 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 AP000593.1-201ENST00000393668 712 ntBASIC14.8□□□□□ -0.04
SSSCA1O60232 CROCCP5-201ENST00000436658 830 ntBASIC14.8□□□□□ -0.04
SSSCA1O60232 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.8□□□□□ -0.04
SSSCA1O60232 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.8□□□□□ -0.04
SSSCA1O60232 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.8□□□□□ -0.04
SSSCA1O60232 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.8□□□□□ -0.04
SSSCA1O60232 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SSSCA1O60232 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.8□□□□□ -0.04
SSSCA1O60232 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.8□□□□□ -0.04
SSSCA1O60232 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.8□□□□□ -0.04
SSSCA1O60232 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SSSCA1O60232 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.8□□□□□ -0.04
SSSCA1O60232 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SSSCA1O60232 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SSSCA1O60232 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSSCA1O60232 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.79□□□□□ -0.04
SSSCA1O60232 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSSCA1O60232 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSSCA1O60232 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSSCA1O60232 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms