Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 FAM210CP-201ENST00000445714 574 ntBASIC16.16■□□□□ 0.18
TRAF3IP2O43734 AC112907.2-201ENST00000448639 330 ntBASIC16.16■□□□□ 0.18
TRAF3IP2O43734 AC113404.2-201ENST00000507884 177 ntBASIC16.16■□□□□ 0.18
TRAF3IP2O43734 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 AP000997.3-201ENST00000623333 2250 ntBASIC16.15■□□□□ 0.18
TRAF3IP2O43734 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP2O43734 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAF3IP2O43734 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAF3IP2O43734 AC018470.1-201ENST00000624790 3129 ntBASIC16.14■□□□□ 0.18
TRAF3IP2O43734 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAF3IP2O43734 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 AC083849.1-201ENST00000615227 514 ntBASIC16.14■□□□□ 0.17
TRAF3IP2O43734 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP2O43734 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms