Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF13O43567 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 AC093677.2-201ENST00000600169 1863 ntBASIC16.53■□□□□ 0.24
RNF13O43567 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 GMCL1P1-201ENST00000463439 1581 ntBASIC16.53■□□□□ 0.24
RNF13O43567 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 AL596275.1-201ENST00000423464 877 ntBASIC16.53■□□□□ 0.24
RNF13O43567 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF13O43567 AC010947.1-201ENST00000623454 693 ntBASIC16.53■□□□□ 0.24
RNF13O43567 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF13O43567 AL163051.1-201ENST00000569214 1512 ntBASIC16.53■□□□□ 0.24
RNF13O43567 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RNF13O43567 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF13O43567 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF13O43567 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF13O43567 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF13O43567 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF13O43567 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 INGX-201ENST00000359239 846 ntBASIC16.52■□□□□ 0.24
RNF13O43567 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF13O43567 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF13O43567 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 AC112497.1-201ENST00000624824 639 ntBASIC16.52■□□□□ 0.24
RNF13O43567 AC066615.1-201ENST00000640911 628 ntBASIC16.52■□□□□ 0.24
RNF13O43567 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF13O43567 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF13O43567 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF13O43567 AC009102.3-201ENST00000623118 1491 ntBASIC16.52■□□□□ 0.23
RNF13O43567 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF13O43567 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.52■□□□□ 0.23
RNF13O43567 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF13O43567 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RNF13O43567 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF13O43567 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF13O43567 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF13O43567 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 AC012313.1-201ENST00000593393 3059 ntBASIC16.51■□□□□ 0.23
RNF13O43567 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.51■□□□□ 0.23
RNF13O43567 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF13O43567 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 MIR149-201ENST00000384879 89 ntBASIC16.51■□□□□ 0.23
RNF13O43567 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF13O43567 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF13O43567 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF13O43567 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RNF13O43567 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF13O43567 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF13O43567 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF13O43567 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF13O43567 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms