Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 AC006116.8-202ENST00000587620 1550 ntBASIC19.97■□□□□ 0.79
CCP110O43303 KRT8P3-201ENST00000519669 1449 ntBASIC19.97■□□□□ 0.79
CCP110O43303 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCP110O43303 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.97■□□□□ 0.79
CCP110O43303 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.97■□□□□ 0.79
CCP110O43303 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 TMEM191A-211ENST00000637163 1067 ntBASIC19.97■□□□□ 0.79
CCP110O43303 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 AL096828.2-201ENST00000567259 1965 ntBASIC19.97■□□□□ 0.79
CCP110O43303 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.97■□□□□ 0.79
CCP110O43303 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCP110O43303 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCP110O43303 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCP110O43303 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.96■□□□□ 0.79
CCP110O43303 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.96■□□□□ 0.79
CCP110O43303 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.96■□□□□ 0.79
CCP110O43303 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCP110O43303 FAM197Y1-201ENST00000421178 764 ntBASIC19.96■□□□□ 0.79
CCP110O43303 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.96■□□□□ 0.79
CCP110O43303 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.96■□□□□ 0.79
CCP110O43303 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CCP110O43303 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.96■□□□□ 0.79
CCP110O43303 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCP110O43303 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.96■□□□□ 0.79
CCP110O43303 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCP110O43303 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 AL135905.2-201ENST00000584934 1404 ntBASIC19.95■□□□□ 0.78
CCP110O43303 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCP110O43303 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 AC091390.4-202ENST00000476426 537 ntBASIC19.95■□□□□ 0.78
CCP110O43303 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.95■□□□□ 0.78
CCP110O43303 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCP110O43303 AL031985.4-201ENST00000642138 673 ntBASIC19.95■□□□□ 0.78
CCP110O43303 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.95■□□□□ 0.78
CCP110O43303 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCP110O43303 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
CCP110O43303 AL121761.2-201ENST00000598007 1648 ntBASIC19.94■□□□□ 0.78
CCP110O43303 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.94■□□□□ 0.78
CCP110O43303 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.94■□□□□ 0.78
CCP110O43303 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 RPS2P55-201ENST00000397318 883 ntBASIC19.94■□□□□ 0.78
CCP110O43303 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 AC107956.1-201ENST00000494359 873 ntBASIC19.94■□□□□ 0.78
CCP110O43303 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.94■□□□□ 0.78
CCP110O43303 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.94■□□□□ 0.78
CCP110O43303 AC026271.3-201ENST00000571884 352 ntBASIC19.94■□□□□ 0.78
CCP110O43303 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.94■□□□□ 0.78
CCP110O43303 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.94■□□□□ 0.78
CCP110O43303 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCP110O43303 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms