Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CASQ2O14958 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.24■□□□□ 0.35
CASQ2O14958 AC069236.1-201ENST00000604339 616 ntBASIC17.24■□□□□ 0.35
CASQ2O14958 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.24■□□□□ 0.35
CASQ2O14958 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.24■□□□□ 0.35
CASQ2O14958 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.24■□□□□ 0.35
CASQ2O14958 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CASQ2O14958 AC126755.1-201ENST00000525846 6405 ntBASIC17.24■□□□□ 0.35
CASQ2O14958 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASQ2O14958 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASQ2O14958 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CASQ2O14958 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CASQ2O14958 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.23■□□□□ 0.35
CASQ2O14958 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.23■□□□□ 0.35
CASQ2O14958 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.23■□□□□ 0.35
CASQ2O14958 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CASQ2O14958 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.23■□□□□ 0.35
CASQ2O14958 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.23■□□□□ 0.35
CASQ2O14958 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CASQ2O14958 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.23■□□□□ 0.35
CASQ2O14958 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.23■□□□□ 0.35
CASQ2O14958 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.23■□□□□ 0.35
CASQ2O14958 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ2O14958 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CASQ2O14958 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.22■□□□□ 0.35
CASQ2O14958 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ2O14958 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.22■□□□□ 0.35
CASQ2O14958 AGGF1P2-201ENST00000426656 2106 ntBASIC17.22■□□□□ 0.35
CASQ2O14958 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ2O14958 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.22■□□□□ 0.35
CASQ2O14958 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.22■□□□□ 0.35
CASQ2O14958 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.22■□□□□ 0.35
CASQ2O14958 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CASQ2O14958 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CASQ2O14958 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ2O14958 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.21■□□□□ 0.35
CASQ2O14958 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CASQ2O14958 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ2O14958 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CASQ2O14958 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ2O14958 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms