Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTCAO00442 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTCAO00442 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 AC112907.2-201ENST00000448639 330 ntBASIC17.31■□□□□ 0.36
RTCAO00442 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.31■□□□□ 0.36
RTCAO00442 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.31■□□□□ 0.36
RTCAO00442 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.31■□□□□ 0.36
RTCAO00442 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
RTCAO00442 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 AC093010.1-201ENST00000473625 1624 ntBASIC17.31■□□□□ 0.36
RTCAO00442 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.31■□□□□ 0.36
RTCAO00442 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTCAO00442 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RTCAO00442 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 HOMER2P1-201ENST00000455653 964 ntBASIC17.3■□□□□ 0.36
RTCAO00442 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 AC063952.2-201ENST00000498792 1227 ntBASIC17.3■□□□□ 0.36
RTCAO00442 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RTCAO00442 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.3■□□□□ 0.36
RTCAO00442 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RTCAO00442 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTCAO00442 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTCAO00442 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.29■□□□□ 0.36
RTCAO00442 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.29■□□□□ 0.36
RTCAO00442 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.29■□□□□ 0.36
RTCAO00442 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.29■□□□□ 0.36
RTCAO00442 AC022616.7-201ENST00000525383 220 ntBASIC17.29■□□□□ 0.36
RTCAO00442 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
RTCAO00442 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.29■□□□□ 0.36
RTCAO00442 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.29■□□□□ 0.36
RTCAO00442 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.29■□□□□ 0.36
RTCAO00442 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 AC005332.8-201ENST00000622750 2735 ntBASIC17.29■□□□□ 0.36
RTCAO00442 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTCAO00442 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RTCAO00442 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTCAO00442 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RTCAO00442 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RTCAO00442 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.28■□□□□ 0.36
RTCAO00442 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTCAO00442 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms