Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3B2A6NCE7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3B2A6NCE7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MAP1LC3B2A6NCE7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3B2A6NCE7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 HLA-A-209ENST00000638375 975 ntBASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 KRT8P41-201ENST00000533985 1514 ntBASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3B2A6NCE7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.33□□□□□ -0.11
MAP1LC3B2A6NCE7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3B2A6NCE7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
MAP1LC3B2A6NCE7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3B2A6NCE7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3B2A6NCE7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3B2A6NCE7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 AL138688.1-201ENST00000624851 1594 ntBASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 AL355312.1-201ENST00000407115 2176 ntBASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3B2A6NCE7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 PCDHB19P-201ENST00000570871 2371 ntBASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 AL513477.1-201ENST00000602865 2407 ntBASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 CROCCP2-202ENST00000412962 2773 ntBASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 KRT18P41-201ENST00000518924 1277 ntBASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 AL121832.2-201ENST00000610979 668 ntBASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MAP1LC3B2A6NCE7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms